Class Bases

    • Constructor Detail

      • Bases

        public Bases()
      • Bases

        public Bases​(int position,
                     byte[] sequence)
    • Method Detail

      • getBases

        public byte[] getBases()
      • setBases

        public void setBases​(byte[] bases)
      • getOperator

        public byte getOperator()
        Description copied from interface: ReadFeature
        Read features are distinguished by operator, similar to cigar operator.
        Specified by:
        getOperator in interface ReadFeature
        Returns:
        type of the read feature
      • getPosition

        public int getPosition()
        Specified by:
        getPosition in interface ReadFeature
        Returns:
        zero-based position in the read
      • setPosition

        public void setPosition​(int position)
        Specified by:
        setPosition in interface ReadFeature
      • hashCode

        public int hashCode()
        Overrides:
        hashCode in class Object