Package htsjdk.samtools.cram.build
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Class Summary Class Description CompressionHeaderFactory A class responsible for decisions about which encodings to use for a given set of records.ContainerFactory ContainerParser Cram2SamRecordFactory CramContainerHeaderIterator Iterate over CRAM containers from an input stream, and unlikeCramContainerIterator
only the header of each container is read, rather than the whole stream.CramContainerIterator An iterator of CRAM containers read from anInputStream
.CramIO A collection of methods to open and close CRAM files.CramNormalizer CramSpanContainerIterator An iterator of CRAM containers read from locations inSeekableStream
.Sam2CramRecordFactory Utils