RNAlib-2.4.16
Here is a list of all documented functions, variables, defines, enums, and typedefs with links to the documentation:
- p -
pack_structure() :
structures.h
PAIR :
basic.h
pair_info :
alignments.h
pairs :
RNAstruct.h
paramT :
basic.h
parenthesis_structure() :
structures.h
parenthesis_zuker() :
structures.h
parse_gquad() :
gquad.h
parse_structure() :
RNAstruct.h
path_t :
paths.h
pbacktrack() :
part_func.h
pbacktrack5() :
part_func.h
pbacktrack_circ() :
part_func.h
pf_circ_fold() :
part_func.h
pf_fold() :
part_func.h
pf_fold_par() :
part_func.h
pf_interact() :
part_func_up.h
pf_paramT :
basic.h
pf_scale :
model.h
pf_unstru() :
part_func_up.h
pfl_fold() :
LPfold.h
pfl_fold_par() :
LPfold.h
plist :
basic.h
pr :
fold_vars.h
print_bppm() :
profiledist.h
print_energy :
subopt.h
print_tree() :
treedist.h
print_tty_constraint() :
hard.h
print_tty_constraint_full() :
hard.h
print_tty_input_seq() :
basic.h
print_tty_input_seq_str() :
basic.h
profile_edit_distance() :
profiledist.h
progress_callback :
perturbation_fold.h
PS_color_aln() :
alignments.h
PS_dot_plot() :
probabilities.h
PS_dot_plot_list() :
probabilities.h
PS_rna_plot() :
structures.h
PS_rna_plot_a() :
structures.h
PS_rna_plot_a_gquad() :
structures.h
pu_contrib :
basic.h
pu_out :
basic.h
putoutpU_prob() :
LPfold.h
putoutpU_prob_bin() :
LPfold.h
vrna_param_t :
basic.h
VRNA_PARAMETER_FORMAT_DEFAULT :
io.h
vrna_params() :
basic.h
vrna_params_copy() :
basic.h
vrna_params_load() :
io.h
vrna_params_load_defaults() :
io.h
vrna_params_load_DNA_Mathews1999() :
io.h
vrna_params_load_DNA_Mathews2004() :
io.h
vrna_params_load_from_string() :
io.h
vrna_params_load_RNA_Andronescu2007() :
io.h
vrna_params_load_RNA_Langdon2018() :
io.h
vrna_params_load_RNA_misc_special_hairpins() :
io.h
vrna_params_load_RNA_Turner1999() :
io.h
vrna_params_load_RNA_Turner2004() :
io.h
vrna_params_reset() :
basic.h
vrna_params_save() :
io.h
vrna_params_subst() :
basic.h
vrna_path() :
walk.h
VRNA_PATH_DEFAULT :
walk.h
vrna_path_direct() :
paths.h
vrna_path_direct_ub() :
paths.h
vrna_path_findpath() :
findpath.h
vrna_path_findpath_saddle() :
findpath.h
vrna_path_findpath_saddle_ub() :
findpath.h
vrna_path_findpath_ub() :
findpath.h
vrna_path_free() :
paths.h
vrna_path_gradient() :
walk.h
VRNA_PATH_NO_TRANSITION_OUTPUT :
walk.h
vrna_path_options_findpath() :
paths.h
vrna_path_options_free() :
paths.h
vrna_path_options_t :
paths.h
VRNA_PATH_RANDOM :
walk.h
vrna_path_random() :
walk.h
VRNA_PATH_STEEPEST_DESCENT :
walk.h
vrna_path_t :
paths.h
VRNA_PATH_TYPE_DOT_BRACKET :
paths.h
VRNA_PATH_TYPE_MOVES :
paths.h
vrna_pbacktrack() :
boltzmann_sampling.h
vrna_pbacktrack5() :
boltzmann_sampling.h
vrna_pbacktrack5_cb() :
boltzmann_sampling.h
vrna_pbacktrack5_num() :
boltzmann_sampling.h
vrna_pbacktrack5_resume() :
boltzmann_sampling.h
vrna_pbacktrack5_resume_cb() :
boltzmann_sampling.h
vrna_pbacktrack5_TwoD() :
2Dpfold.h
vrna_pbacktrack_cb() :
boltzmann_sampling.h
VRNA_PBACKTRACK_DEFAULT :
boltzmann_sampling.h
vrna_pbacktrack_mem_free() :
boltzmann_sampling.h
vrna_pbacktrack_mem_t :
boltzmann_sampling.h
VRNA_PBACKTRACK_NON_REDUNDANT :
boltzmann_sampling.h
vrna_pbacktrack_num() :
boltzmann_sampling.h
vrna_pbacktrack_resume() :
boltzmann_sampling.h
vrna_pbacktrack_resume_cb() :
boltzmann_sampling.h
vrna_pbacktrack_TwoD() :
2Dpfold.h
vrna_pf() :
part_func.h
vrna_pf_alifold() :
part_func.h
vrna_pf_circalifold() :
part_func.h
vrna_pf_circfold() :
part_func.h
vrna_pf_co_fold() :
part_func.h
vrna_pf_dimer() :
part_func.h
vrna_pf_dimer_concentrations() :
concentrations.h
vrna_pf_dimer_probs() :
equilibrium_probs.h
vrna_pf_float_precision() :
part_func.h
vrna_pf_fold() :
part_func.h
vrna_pf_TwoD() :
2Dpfold.h
vrna_pfl_fold() :
part_func_window.h
vrna_pfl_fold_cb() :
part_func_window.h
vrna_pfl_fold_up() :
part_func_window.h
vrna_pfl_fold_up_cb() :
part_func_window.h
vrna_pinfo_t :
alignments.h
vrna_plist() :
structures.h
vrna_plist_from_probs() :
structures.h
vrna_plist_t :
basic.h
VRNA_PLIST_TYPE_BASEPAIR :
structures.h
VRNA_PLIST_TYPE_GQUAD :
structures.h
VRNA_PLIST_TYPE_H_MOTIF :
structures.h
VRNA_PLIST_TYPE_I_MOTIF :
structures.h
VRNA_PLIST_TYPE_STACK :
structures.h
VRNA_PLIST_TYPE_UD_MOTIF :
structures.h
vrna_plot_coords() :
layouts.h
vrna_plot_coords_circular() :
layouts.h
vrna_plot_coords_circular_pt() :
layouts.h
vrna_plot_coords_naview() :
naview.h
vrna_plot_coords_naview_pt() :
naview.h
vrna_plot_coords_pt() :
layouts.h
vrna_plot_coords_puzzler() :
RNApuzzler.h
vrna_plot_coords_puzzler_pt() :
RNApuzzler.h
vrna_plot_coords_simple() :
layouts.h
vrna_plot_coords_simple_pt() :
layouts.h
vrna_plot_coords_turtle() :
RNAturtle.h
vrna_plot_coords_turtle_pt() :
RNAturtle.h
vrna_plot_layout() :
layouts.h
vrna_plot_layout_circular() :
layouts.h
vrna_plot_layout_free() :
layouts.h
vrna_plot_layout_naview() :
layouts.h
vrna_plot_layout_puzzler() :
layouts.h
vrna_plot_layout_simple() :
layouts.h
vrna_plot_layout_t :
layouts.h
vrna_plot_layout_turtle() :
layouts.h
vrna_plot_options_puzzler() :
RNApuzzler.h
vrna_plot_options_puzzler_free() :
RNApuzzler.h
VRNA_PLOT_TYPE_CIRCULAR :
layouts.h
VRNA_PLOT_TYPE_NAVIEW :
layouts.h
VRNA_PLOT_TYPE_PUZZLER :
layouts.h
VRNA_PLOT_TYPE_SIMPLE :
layouts.h
VRNA_PLOT_TYPE_TURTLE :
layouts.h
vrna_positional_entropy() :
equilibrium_probs.h
vrna_pr_energy() :
equilibrium_probs.h
vrna_pr_structure() :
equilibrium_probs.h
vrna_probs_window() :
part_func_window.h
VRNA_PROBS_WINDOW_BPP :
part_func_window.h
vrna_probs_window_callback :
part_func_window.h
VRNA_PROBS_WINDOW_PF :
part_func_window.h
VRNA_PROBS_WINDOW_STACKP :
part_func_window.h
VRNA_PROBS_WINDOW_UP :
part_func_window.h
VRNA_PROBS_WINDOW_UP_SPLIT :
part_func_window.h
vrna_pt_ali_get() :
structures.h
vrna_pt_pk_get() :
structures.h
vrna_pt_pk_remove() :
structures.h
vrna_pt_snoop_get() :
structures.h
vrna_ptable() :
structures.h
vrna_ptable_copy() :
structures.h
vrna_ptable_from_string() :
structures.h
vrna_ptypes() :
alphabet.h
Generated on Thu Oct 15 2020 11:11:30 for RNAlib-2.4.16 by
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