Package: barriers
Version: 1.8.1-1
Architecture: amd64
Maintainer: Ronny Lorenz <ronny@tbi.univie.ac.at>
Installed-Size: 149
Depends: libc6 (>= 2.34), perl
Filename: amd64/barriers_1.8.1-1_amd64.deb
Size: 57798
MD5sum: 1ad1748a1aca175e8c62b2cce16fe5d4
SHA1: d097cadf0df82f902bd676da77e4e4b0e10c2185
SHA256: 32b61ab2f5b21c9aaff8b3c1ca88c50c53c987f5d4499cfc904c01726b0d7dff
Section: science
Priority: optional
Homepage: http://www.tbi.univie.ac.at/RNA/Barriers
Description: Compute local minima and energy barriers of a landscape
 The program barriers reads an energy sorted list of conformations of a landscape, and computes local minima and energy barriers of the landscape.
 For RNA secondary structures, suitable input is produced by RNAsubopt For each local minimum found it prints to stdout, the conformation of the minimum, its energy, the number of the "parent"-minimum it merges with, and the height of the energy barrier. Additional information on each minimum, such as saddle point conformation and basin sizes can be included via options.
 A PostScript drawing of the resulting tree is written to "tree.ps" in the current directory.

Package: perl-rna
Source: viennarna
Version: 2.7.0-1
Architecture: amd64
Maintainer: Ronny Lorenz <ronny@tbi.univie.ac.at>
Installed-Size: 10847
Depends: perl (>= 5.36.0-7), perlapi-5.36.0, libc6 (>= 2.35), libgcc-s1 (>= 4.0), libgomp1 (>= 4.9), libgsl27 (>= 2.7.1), libmpfr6 (>= 3.1.3), libstdc++6 (>= 11)
Conflicts: vienna-rna (<< 2.2.1-2)
Filename: amd64/perl-rna_2.7.0-1_amd64.deb
Size: 2148034
MD5sum: b957b45b0518056e984c56abb6dc51b5
SHA1: 99611f20b41b2de07ef7e33597a352a24624ecd3
SHA256: 78fe8d3ac813ccca45ff5fad7340851b8c729fc422b8a2b0f191dc203245fab9
Section: perl
Priority: optional
Description: Perl bindings to ViennaRNA RNAlib
 The RNA module to access RNAlib C-library functions from
 within Perl scripts

Package: perl-rna-barrier
Source: barriers
Version: 1.8.1-1
Architecture: amd64
Maintainer: Ronny Lorenz <ronny@tbi.univie.ac.at>
Installed-Size: 27
Depends: perl:any, perl, perl-rna
Filename: amd64/perl-rna-barrier_1.8.1-1_amd64.deb
Size: 6546
MD5sum: b3b28d1d96b4c9f731f59c4a1b17356c
SHA1: dd87dad65e3efe1b2a801605e062fff350f55384
SHA256: 15f764067beee16ffdd7467864c0cbdeae8b9f079c647a031763a6eb057d7191
Section: perl
Priority: optional
Homepage: http://www.tbi.univie.ac.at/RNA/Barriers
Description: Perl module and scripts for Barriers
 The RNA/barrier module and perl scripts to access some functionality of the Barriers program

Package: python3-rna
Source: viennarna
Version: 2.7.0-1
Architecture: amd64
Maintainer: Ronny Lorenz <ronny@tbi.univie.ac.at>
Installed-Size: 10993
Depends: python3 (<< 3.12), python3 (>= 3.11~), python3:any, libc6 (>= 2.35), libgcc-s1 (>= 4.0), libgomp1 (>= 4.9), libgsl27 (>= 2.7.1), libmpfr6 (>= 3.1.3), libstdc++6 (>= 11)
Conflicts: vienna-rna (<< 2.2.1-2)
Filename: amd64/python3-rna_2.7.0-1_amd64.deb
Size: 2051128
MD5sum: 01ae7a7385e2eb1035170ae239e88c25
SHA1: 36d619890ae5ede95c44e7f57a89e03b56b2c2ec
SHA256: 97cfc0d07c471fc750290a69b3ab3a2f54f744b06b5f1ba72ea40cb22d61fe2d
Section: python
Priority: optional
Description: Python 3 bindings to ViennaRNA RNAlib
 The RNA class to access RNAlib C-library functions from
 within Python 3 scripts

Package: viennarna
Version: 2.7.0-1
Architecture: amd64
Maintainer: Ronny Lorenz <ronny@tbi.univie.ac.at>
Installed-Size: 36645
Depends: libgomp1 (>= 4.9), libgsl27 (>= 2.7.1), libmpfr6 (>= 3.1.3), liblapack | liblapack3, liblapacke, libc6 (>= 2.35), libgcc-s1 (>= 3.3.1), liblapack3 | liblapack.so.3, libstdc++6 (>= 11)
Recommends: python3-rna, perl-rna
Breaks: vienna-rna (<< 2.2.1-2)
Replaces: vienna-rna (<< 2.2.1-2)
Filename: amd64/viennarna_2.7.0-1_amd64.deb
Size: 3132002
MD5sum: abecb59ef5118f63b4e0ea84352e0cb0
SHA1: 14570e05e206026e312ad76afce69afbeb817d49
SHA256: dc2e86cc2c2626fec58ddbd27b01eb0bb06b7e2730611dfe605d4c561e3e4362
Section: science
Priority: optional
Description: Vienna RNA Package - Core
 The Vienna RNA Package Core consists of several executable
 programs and various scripts for the prediction and comparison
 of RNA secondary structures.

Package: viennarna-dev
Source: viennarna
Version: 2.7.0-1
Architecture: amd64
Maintainer: Ronny Lorenz <ronny@tbi.univie.ac.at>
Installed-Size: 95352
Depends: libgsl0-dev | libgsl-dev, libmpfr-dev
Conflicts: vienna-rna (<< 2.2.1-2)
Filename: amd64/viennarna-dev_2.7.0-1_amd64.deb
Size: 30818948
MD5sum: 34a7dc8e07e2fd9db1f72f6dfd7c50de
SHA1: f4fee07aff014cff3673a89c2de41c2b97d0dd5f
SHA256: 17cc3e657608a4cf48c7378ec5b07d8f925b58b63427292d35a98fcab9b62d51
Section: devel
Priority: optional
Description: ViennaRNA Package - RNAlib Development files
 Header files and static RNAlib C-library of the ViennaRNA Package

Package: viennarna-doc
Source: viennarna
Version: 2.7.0-1
Architecture: all
Maintainer: Ronny Lorenz <ronny@tbi.univie.ac.at>
Installed-Size: 25763
Conflicts: vienna-rna (<< 2.2.1-2)
Filename: all/viennarna-doc_2.7.0-1_all.deb
Size: 11955050
MD5sum: 54c0f98c7f63473b822dcefe96fd8d27
SHA1: f270c9127a1dea48e97dc22b96b45f5218e9dad1
SHA256: 9b2b9cab71c5bc4972a0ad8e743c05f7a8539a9e146eea0ec2d33e94c8e08097
Section: doc
Priority: optional
Description: ViennaRNA Package - RNAlib Reference Manual
 Reference Manual for RNAlib C-library in PDF and HTML format